celloracle.data_conversion module

The data_conversion module implements data conversion between different platform.

celloracle.data_conversion.seurat_object_to_anndata(file_path_seurat_object, delete_tmp_file=True)

Convert seurat object into anndata.

Parameters

• file_path_seurat_object (str) – File path of seurat object. Seurat object should be saved as Rds format.

• delete_tmp_file (bool) – Whether to delete temporary file.

Returns

anndata object.

Return type

anndata